Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548c-3p in AC Brain Sun Cluster 2 Table contains all genes in the AC Brain Sun cluster number 2. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548c-3p 64430 C14orf135 chromosome 14 open reading frame 135 [Source:HGNC Symbol;Acc:20349] T 158067 AK8 adenylate kinase 8 [Source:HGNC Symbol;Acc:26526] zzz999 91419 XRCC6BP1 XRCC6 binding protein 1 [Source:HGNC Symbol;Acc:29452] T 9611 NCOR1 nuclear receptor corepressor 1 [Source:HGNC Symbol;Acc:7672] T 10891 PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha [Source:HGNC Symbol;Acc:9237] P T 9480 ONECUT2 one cut homeobox 2 [Source:HGNC Symbol;Acc:8139] P T 57505 AARS2 alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:HGNC Symbol;Acc:21022] zzz999 503841 DEFB106A defensin, beta 106A [Source:HGNC Symbol;Acc:18088] zzz999 55761 TTC17 tetratricopeptide repeat domain 17 [Source:HGNC Symbol;Acc:25596] zzz999 55291 PPP6R3 protein phosphatase 6, regulatory subunit 3 [Source:HGNC Symbol;Acc:1173] T 10694 CCT8 chaperonin containing TCP1, subunit 8 (theta) [Source:HGNC Symbol;Acc:1623] T 29102 DROSHA drosha, ribonuclease type III [Source:HGNC Symbol;Acc:17904] T 9187 SLC24A1 solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:HGNC Symbol;Acc:10975] T 55031 USP47 ubiquitin specific peptidase 47 [Source:HGNC Symbol;Acc:20076] T 56261 GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26957] T 466 ATF1 activating transcription factor 1 [Source:HGNC Symbol;Acc:783] T 847 CAT catalase [Source:HGNC Symbol;Acc:1516] T 3093 UBE2K ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast) [Source:HGNC Symbol;Acc:4914] T 57336 ZNF287 zinc finger protein 287 [Source:HGNC Symbol;Acc:13502] zzz999 56242 ZNF253 zinc finger protein 253 [Source:HGNC Symbol;Acc:13497] T 81550 TDRD3 tudor domain containing 3 [Source:HGNC Symbol;Acc:20612] zzz999 6209 RPS15 ribosomal protein S15 [Source:HGNC Symbol;Acc:10388] zzz999 259249 MRGPRX1 MAS-related GPR, member X1 [Source:HGNC Symbol;Acc:17962] zzz999 6929 TCF3 transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) [Source:HGNC Symbol;Acc:11633] P T 55720 TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25542] zzz999 6505 SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:HGNC Symbol;Acc:10939] T 9282 MED14 mediator complex subunit 14 [Source:HGNC Symbol;Acc:2370] T 11211 FZD10 frizzled homolog 10 (Drosophila) [Source:HGNC Symbol;Acc:4039] zzz999 504180 DEFB105A defensin, beta 105A [Source:HGNC Symbol;Acc:18087] zzz999 26245 OR2M4 olfactory receptor, family 2, subfamily M, member 4 [Source:HGNC Symbol;Acc:8270] zzz999 27071 DAPP1 dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:HGNC Symbol;Acc:16500] T 25807 RHBDD3 rhomboid domain containing 3 [Source:HGNC Symbol;Acc:1308] zzz999 65975 STK33 serine/threonine kinase 33 [Source:HGNC Symbol;Acc:14568] T 157869 C8orf84 chromosome 8 open reading frame 84 [Source:HGNC Symbol;Acc:30362] T 9472 AKAP6 A kinase (PRKA) anchor protein 6 [Source:HGNC Symbol;Acc:376] P T 3490 IGFBP7 insulin-like growth factor binding protein 7 [Source:HGNC Symbol;Acc:5476] zzz999 8653 DDX3Y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [Source:HGNC Symbol;Acc:2699] zzz999 5190 PEX6 peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:8859] zzz999 9350 CER1 cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis) [Source:HGNC Symbol;Acc:1862] zzz999 55253 TYW1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25598] zzz999 8929 PHOX2B paired-like homeobox 2b [Source:HGNC Symbol;Acc:9143] P T 90249 UNC5A unc-5 homolog A (C. elegans) [Source:HGNC Symbol;Acc:12567] zzz999 79723 SUV39H2 suppressor of variegation 3-9 homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:17287] T 85462 FHDC1 FH2 domain containing 1 [Source:HGNC Symbol;Acc:29363] T 9857 CEP350 centrosomal protein 350kDa [Source:HGNC Symbol;Acc:24238] T 4093 SMAD9 SMAD family member 9 [Source:HGNC Symbol;Acc:6774] zzz999 7430 EZR ezrin [Source:HGNC Symbol;Acc:12691] T 145645 C15orf43 chromosome 15 open reading frame 43 [Source:HGNC Symbol;Acc:28520] zzz999 54902 TTC19 tetratricopeptide repeat domain 19 [Source:HGNC Symbol;Acc:26006] T 7702 ZNF143 zinc finger protein 143 [Source:HGNC Symbol;Acc:12928] T 27286 SRPX2 sushi-repeat containing protein, X-linked 2 [Source:HGNC Symbol;Acc:30668] zzz999 57178 ZMIZ1 zinc finger, MIZ-type containing 1 [Source:HGNC Symbol;Acc:16493] T 83989 FAM172A family with sequence similarity 172, member A [Source:HGNC Symbol;Acc:25365] T 51631 LUC7L2 LUC7-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:21608] P T 3695 ITGB7 integrin, beta 7 [Source:HGNC Symbol;Acc:6162] zzz999 93 ACVR2B activin A receptor, type IIB [Source:HGNC Symbol;Acc:174] T 28971 C11orf67 chromosome 11 open reading frame 67 [Source:HGNC Symbol;Acc:30205] zzz999 11077 HSF2BP heat shock transcription factor 2 binding protein [Source:HGNC Symbol;Acc:5226] zzz999 4951 OCM2 oncomodulin 2 [Source:HGNC Symbol;Acc:34396] zzz999 29966 STRN3 striatin, calmodulin binding protein 3 [Source:HGNC Symbol;Acc:15720] T 25914 RTTN rotatin [Source:HGNC Symbol;Acc:18654] T 1184 CLCN5 chloride channel 5 [Source:HGNC Symbol;Acc:2023] T 7507 XPA xeroderma pigmentosum, complementation group A [Source:HGNC Symbol;Acc:12814] zzz999 79871 RPAP2 RNA polymerase II associated protein 2 [Source:HGNC Symbol;Acc:25791] T 5326 PLAGL2 pleiomorphic adenoma gene-like 2 [Source:HGNC Symbol;Acc:9047] P T 23603 CORO1C coronin, actin binding protein, 1C [Source:HGNC Symbol;Acc:2254] zzz999 574028 zzz999 Chronic lymphocytic leukemia up-regulated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q5K131] T 549 AUH AU RNA binding protein/enoyl-CoA hydratase [Source:HGNC Symbol;Acc:890] T 63898 SH2D4A SH2 domain containing 4A [Source:HGNC Symbol;Acc:26102] zzz999 10910 SUGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) [Source:HGNC Symbol;Acc:16987] P T 54665 RSBN1 round spermatid basic protein 1 [Source:HGNC Symbol;Acc:25642] T 26269 FBXO8 F-box protein 8 [Source:HGNC Symbol;Acc:13587] T 161357 MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 [Source:HGNC Symbol;Acc:19835] P T 442213 C6orf138 chromosome 6 open reading frame 138 [Source:HGNC Symbol;Acc:21345] zzz999 2289 FKBP5 FK506 binding protein 5 [Source:HGNC Symbol;Acc:3721] T 112574 SNX18 sorting nexin 18 [Source:HGNC Symbol;Acc:19245] T 160140 C11orf65 chromosome 11 open reading frame 65 [Source:HGNC Symbol;Acc:28519] zzz999 56267 CCBL2 cysteine conjugate-beta lyase 2 [Source:HGNC Symbol;Acc:33238] zzz999 23786 BCL2L13 BCL2-like 13 (apoptosis facilitator) [Source:HGNC Symbol;Acc:17164] T 2072 ERCC4 excision repair cross-complementing rodent repair deficiency, complementation group 4 [Source:HGNC Symbol;Acc:3436] T 58528 RRAGD Ras-related GTP binding D [Source:HGNC Symbol;Acc:19903] zzz999 126231 ZNF573 zinc finger protein 573 [Source:HGNC Symbol;Acc:26420] zzz999 6827 SUPT4H1 suppressor of Ty 4 homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:11467] zzz999 144193 AMDHD1 amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:28577] T 9556 C14orf2 chromosome 14 open reading frame 2 [Source:HGNC Symbol;Acc:1188] zzz999 79768 C15orf29 chromosome 15 open reading frame 29 [Source:HGNC Symbol;Acc:26199] T 91050 CCDC149 coiled-coil domain containing 149 [Source:HGNC Symbol;Acc:25405] T 4719 NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) [Source:HGNC Symbol;Acc:7707] T 54801 HAUS6 HAUS augmin-like complex, subunit 6 [Source:HGNC Symbol;Acc:25948] T 1839 HBEGF heparin-binding EGF-like growth factor [Source:HGNC Symbol;Acc:3059] zzz999 58490 RPRD1B regulation of nuclear pre-mRNA domain containing 1B [Source:HGNC Symbol;Acc:16209] T 9863 MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 [Source:HGNC Symbol;Acc:18957] T 50613 UBQLN3 ubiquilin 3 [Source:HGNC Symbol;Acc:12510] zzz999 6011 GRK1 G protein-coupled receptor kinase 1 [Source:HGNC Symbol;Acc:10013] zzz999 127253 TYW3 tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24757] T 291 SLC25A4 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:HGNC Symbol;Acc:10990] zzz999 55258 THNSL2 threonine synthase-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:25602] zzz999 148398 SAMD11 sterile alpha motif domain containing 11 [Source:HGNC Symbol;Acc:28706] zzz999 29097 CNIH4 cornichon homolog 4 (Drosophila) [Source:HGNC Symbol;Acc:25013] T 9627 SNCAIP synuclein, alpha interacting protein [Source:HGNC Symbol;Acc:11139] zzz999 54675 CRLS1 cardiolipin synthase 1 [Source:HGNC Symbol;Acc:16148] T 60481 ELOVL5 ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast) [Source:HGNC Symbol;Acc:21308] T 10962 MLLT11 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 [Source:HGNC Symbol;Acc:16997] T 79908 BTNL8 butyrophilin-like 8 [Source:HGNC Symbol;Acc:26131] zzz999 9580 SOX13 SRY (sex determining region Y)-box 13 [Source:HGNC Symbol;Acc:11192] T 1360 CPB1 carboxypeptidase B1 (tissue) [Source:HGNC Symbol;Acc:2299] zzz999 60625 DHX35 DEAH (Asp-Glu-Ala-His) box polypeptide 35 [Source:HGNC Symbol;Acc:15861] T 130535 KCTD18 potassium channel tetramerisation domain containing 18 [Source:HGNC Symbol;Acc:26446] P T 22822 PHLDA1 pleckstrin homology-like domain, family A, member 1 [Source:HGNC Symbol;Acc:8933] T

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